Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 DGCR10-201ENST00000609839 495 ntBASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 AC126755.1-201ENST00000525846 6405 ntBASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 FRMD8P1-201ENST00000440433 1524 ntBASIC14.36□□□□□ -0.11
SEC22CQ9BRL7 AL009178.2-201ENST00000597278 2719 ntBASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms