Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 AL049840.3-201ENST00000602669 611 ntBASIC15.23■□□□□ 0.03
USB1Q9BQ65 AL139424.1-201ENST00000607572 797 ntBASIC15.23■□□□□ 0.03
USB1Q9BQ65 AP000240.1-201ENST00000609910 452 ntBASIC15.23■□□□□ 0.03
USB1Q9BQ65 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 AP000347.1-202ENST00000435868 847 ntBASIC15.22■□□□□ 0.03
USB1Q9BQ65 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 AC006518.1-201ENST00000541449 943 ntBASIC15.22■□□□□ 0.03
USB1Q9BQ65 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.22■□□□□ 0.03
USB1Q9BQ65 GGTLC5P-201ENST00000617623 998 ntBASIC15.22■□□□□ 0.03
USB1Q9BQ65 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
USB1Q9BQ65 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USB1Q9BQ65 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 GPR89P-201ENST00000407924 1495 ntBASIC15.21■□□□□ 0.03
USB1Q9BQ65 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 PKD1P5-201ENST00000532415 10291 ntBASIC15.21■□□□□ 0.03
USB1Q9BQ65 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 RNA5SP415-201ENST00000517246 115 ntBASIC15.21■□□□□ 0.03
USB1Q9BQ65 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 TERC-201ENST00000602385 541 ntBASIC15.21■□□□□ 0.03
USB1Q9BQ65 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USB1Q9BQ65 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.21■□□□□ 0.03
USB1Q9BQ65 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms