Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CPNE1Q99829 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE1Q99829 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CPNE1Q99829 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE1Q99829 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE1Q99829 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CPNE1Q99829 AL590787.1-201ENST00000568856 1315 ntBASIC16.96■□□□□ 0.3
CPNE1Q99829 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE1Q99829 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE1Q99829 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE1Q99829 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.95■□□□□ 0.3
CPNE1Q99829 FAM210CP-201ENST00000445714 574 ntBASIC16.95■□□□□ 0.3
CPNE1Q99829 PRYP5-201ENST00000451909 266 ntBASIC16.95■□□□□ 0.3
CPNE1Q99829 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE1Q99829 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 AL591684.3-201ENST00000605187 298 ntBASIC16.95■□□□□ 0.3
CPNE1Q99829 AC013467.2-201ENST00000605472 835 ntBASIC16.95■□□□□ 0.3
CPNE1Q99829 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE1Q99829 AL139011.1-202ENST00000642063 584 ntBASIC16.95■□□□□ 0.3
CPNE1Q99829 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 ALOX12P2-203ENST00000570921 1945 ntBASIC16.95■□□□□ 0.3
CPNE1Q99829 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPNE1Q99829 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CPNE1Q99829 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE1Q99829 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 ATP5G2P1-201ENST00000433580 426 ntBASIC16.94■□□□□ 0.3
CPNE1Q99829 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.94■□□□□ 0.3
CPNE1Q99829 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE1Q99829 AP005117.1-201ENST00000584346 1413 ntBASIC16.94■□□□□ 0.3
CPNE1Q99829 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE1Q99829 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CPNE1Q99829 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE1Q99829 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE1Q99829 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE1Q99829 AC006277.1-201ENST00000624348 1610 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms