Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.15■□□□□ 0.18
CGREF1Q99674 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CGREF1Q99674 AL671277.2-201ENST00000458060 996 ntBASIC16.15■□□□□ 0.18
CGREF1Q99674 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CGREF1Q99674 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.15■□□□□ 0.18
CGREF1Q99674 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CGREF1Q99674 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.15■□□□□ 0.18
CGREF1Q99674 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
CGREF1Q99674 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.14■□□□□ 0.18
CGREF1Q99674 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CGREF1Q99674 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.14■□□□□ 0.17
CGREF1Q99674 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.14■□□□□ 0.17
CGREF1Q99674 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CGREF1Q99674 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.14■□□□□ 0.17
CGREF1Q99674 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 AC063952.2-201ENST00000498792 1227 ntBASIC16.14■□□□□ 0.17
CGREF1Q99674 DUX4L17-201ENST00000557360 1267 ntBASIC16.14■□□□□ 0.17
CGREF1Q99674 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 AC011498.5-201ENST00000592027 486 ntBASIC16.14■□□□□ 0.17
CGREF1Q99674 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CGREF1Q99674 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CGREF1Q99674 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CGREF1Q99674 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CGREF1Q99674 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CGREF1Q99674 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.14■□□□□ 0.17
CGREF1Q99674 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGREF1Q99674 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.13■□□□□ 0.17
CGREF1Q99674 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.13■□□□□ 0.17
CGREF1Q99674 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.13■□□□□ 0.17
CGREF1Q99674 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.13■□□□□ 0.17
CGREF1Q99674 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CGREF1Q99674 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CGREF1Q99674 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.13■□□□□ 0.17
CGREF1Q99674 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGREF1Q99674 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.12■□□□□ 0.17
CGREF1Q99674 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CGREF1Q99674 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms