Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.5■□□□□ 0.23
PKP4Q99569 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.5■□□□□ 0.23
PKP4Q99569 REXO1L3P-201ENST00000622202 1288 ntBASIC16.5■□□□□ 0.23
PKP4Q99569 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.5■□□□□ 0.23
PKP4Q99569 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PKP4Q99569 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PKP4Q99569 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PKP4Q99569 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PKP4Q99569 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PKP4Q99569 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PKP4Q99569 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.49■□□□□ 0.23
PKP4Q99569 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.49■□□□□ 0.23
PKP4Q99569 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 AC108751.1-201ENST00000490852 363 ntBASIC16.49■□□□□ 0.23
PKP4Q99569 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.49■□□□□ 0.23
PKP4Q99569 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PKP4Q99569 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 AC011676.5-201ENST00000624864 2660 ntBASIC16.49■□□□□ 0.23
PKP4Q99569 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PKP4Q99569 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.49■□□□□ 0.23
PKP4Q99569 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 CROCCP1-201ENST00000426910 5675 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
PKP4Q99569 AC078925.2-201ENST00000624013 1973 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PKP4Q99569 MRPL20P1-201ENST00000400819 433 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PKP4Q99569 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.48■□□□□ 0.23
PKP4Q99569 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.48■□□□□ 0.23
PKP4Q99569 AC009947.1-201ENST00000444350 727 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.48■□□□□ 0.23
PKP4Q99569 OR7E47P-204ENST00000575924 449 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.48■□□□□ 0.23
PKP4Q99569 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PKP4Q99569 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
PKP4Q99569 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PKP4Q99569 TOP3BP1-201ENST00000420768 1380 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PKP4Q99569 AL645728.1-201ENST00000366221 2101 ntBASIC16.48■□□□□ 0.23
PKP4Q99569 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
PKP4Q99569 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms