Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 ME2P1-201ENST00000426028 1970 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 PAUPAR-201ENST00000630360 2965 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 HYMAI-201ENST00000635591 3347 ntBASIC13.79□□□□□ -0.2
RAB40CQ96S21 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 HLA-F-220ENST00000434407 884 ntBASIC13.79□□□□□ -0.2
RAB40CQ96S21 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 AC122714.2-201ENST00000502787 707 ntBASIC13.79□□□□□ -0.2
RAB40CQ96S21 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40CQ96S21 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40CQ96S21 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ALOX12P2-203ENST00000570921 1945 ntBASIC13.78□□□□□ -0.2
RAB40CQ96S21 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 AC024909.3-201ENST00000611513 2257 ntBASIC13.78□□□□□ -0.2
RAB40CQ96S21 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 LIN28AP1-201ENST00000429574 405 ntBASIC13.78□□□□□ -0.2
RAB40CQ96S21 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 GPR32P1-201ENST00000601788 811 ntBASIC13.78□□□□□ -0.2
RAB40CQ96S21 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms