Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 PGM5P2-202ENST00000637225 1043 ntBASIC20.05■□□□□ 0.8
NEK1Q96PY6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.05■□□□□ 0.8
NEK1Q96PY6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 AC006277.1-201ENST00000624348 1610 ntBASIC20.05■□□□□ 0.8
NEK1Q96PY6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEK1Q96PY6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 AL118508.1-201ENST00000613502 2345 ntBASIC20.04■□□□□ 0.8
NEK1Q96PY6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 UBALD1-205ENST00000590891 2641 ntBASIC20.04■□□□□ 0.8
NEK1Q96PY6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 AC013467.2-201ENST00000605472 835 ntBASIC20.04■□□□□ 0.8
NEK1Q96PY6 MIR7706-201ENST00000613747 67 ntBASIC20.04■□□□□ 0.8
NEK1Q96PY6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 AC005593.1-201ENST00000624894 515 ntBASIC20.04■□□□□ 0.8
NEK1Q96PY6 HLA-A-202ENST00000376806 1854 ntBASIC20.04■□□□□ 0.8
NEK1Q96PY6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEK1Q96PY6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.04■□□□□ 0.8
NEK1Q96PY6 AC124067.4-201ENST00000519691 2379 ntBASIC20.03■□□□□ 0.8
NEK1Q96PY6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 AC092910.1-201ENST00000482027 1129 ntBASIC20.03■□□□□ 0.8
NEK1Q96PY6 RNA5SP419-201ENST00000515908 135 ntBASIC20.03■□□□□ 0.8
NEK1Q96PY6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NEK1Q96PY6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.03■□□□□ 0.8
NEK1Q96PY6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 AC117500.6-201ENST00000624871 588 ntBASIC20.02■□□□□ 0.8
NEK1Q96PY6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEK1Q96PY6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms