Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 MPDU1-223ENST00000582151 728 ntBASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 AL132655.2-201ENST00000596276 594 ntBASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NECTIN4Q96NY8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 CETN4P-206ENST00000642099 2168 ntBASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 AC007541.1-201ENST00000570282 1469 ntBASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN4Q96NY8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN4Q96NY8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
NECTIN4Q96NY8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms