Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 CYP2T1P-202ENST00000641596 2535 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 IGHV3-47-201ENST00000425060 335 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC246785.2-201ENST00000432512 513 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC103564.2-201ENST00000432853 1299 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 KRT18P31-201ENST00000506277 1292 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC099336.1-202ENST00000602961 463 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 HLA-A-202ENST00000376806 1854 ntBASIC17.48■□□□□ 0.39
C9orf72Q96LT7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.48■□□□□ 0.39
C9orf72Q96LT7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 FAAHP1-202ENST00000446499 1238 ntBASIC17.48■□□□□ 0.39
C9orf72Q96LT7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 LINC01711-201ENST00000598340 967 ntBASIC17.48■□□□□ 0.39
C9orf72Q96LT7 AC138894.3-201ENST00000603787 634 ntBASIC17.48■□□□□ 0.39
C9orf72Q96LT7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 AL645728.1-201ENST00000366221 2101 ntBASIC17.48■□□□□ 0.39
C9orf72Q96LT7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
C9orf72Q96LT7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 AP005901.3-202ENST00000581653 237 ntBASIC17.47■□□□□ 0.39
C9orf72Q96LT7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 AL353593.2-201ENST00000602529 1483 ntBASIC17.47■□□□□ 0.39
C9orf72Q96LT7 AC009336.1-201ENST00000608941 1553 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms