Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 GGTLC5P-201ENST00000617623 998 ntBASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 AC006116.8-202ENST00000587620 1550 ntBASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIP3Q96DZ5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 UPF3AP3-201ENST00000420996 769 ntBASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 VN2R19P-201ENST00000442399 1052 ntBASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIP3Q96DZ5 TCAF2P1-201ENST00000291129 2421 ntBASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 AP002414.1-201ENST00000391405 1147 ntBASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 SLC25A6P5-201ENST00000435663 894 ntBASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 AL139327.4-201ENST00000612362 153 ntBASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIP3Q96DZ5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms