Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 SLC7A15P-201ENST00000424028 1363 ntBASIC16.73■□□□□ 0.27
CLDN23Q96B33 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 SLC25A1P3-201ENST00000395415 828 ntBASIC16.72■□□□□ 0.27
CLDN23Q96B33 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 AC114501.2-201ENST00000439631 535 ntBASIC16.72■□□□□ 0.27
CLDN23Q96B33 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 RN7SL618P-201ENST00000477850 296 ntBASIC16.72■□□□□ 0.27
CLDN23Q96B33 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN23Q96B33 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN23Q96B33 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.71■□□□□ 0.27
CLDN23Q96B33 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 AL606495.2-201ENST00000605867 535 ntBASIC16.71■□□□□ 0.27
CLDN23Q96B33 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 BX323043.1-201ENST00000641006 1765 ntBASIC16.71■□□□□ 0.27
CLDN23Q96B33 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN23Q96B33 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN23Q96B33 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN23Q96B33 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN23Q96B33 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CLDN23Q96B33 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN23Q96B33 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 AC016396.2-201ENST00000562575 1417 ntBASIC16.7■□□□□ 0.26
CLDN23Q96B33 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 FRMD8P1-201ENST00000440433 1524 ntBASIC16.7■□□□□ 0.26
CLDN23Q96B33 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN23Q96B33 RN7SL837P-201ENST00000463010 287 ntBASIC16.7■□□□□ 0.26
CLDN23Q96B33 RNA5SP410-201ENST00000516285 106 ntBASIC16.7■□□□□ 0.26
CLDN23Q96B33 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 AL512361.1-201ENST00000554200 418 ntBASIC16.7■□□□□ 0.26
CLDN23Q96B33 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN23Q96B33 AC007431.3-201ENST00000623221 587 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms