Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 AC107918.2-201ENST00000530817 355 ntBASIC28.84■■■□□ 2.21
TRIM41Q8WV44 AC140878.1-201ENST00000565277 250 ntBASIC28.84■■■□□ 2.21
TRIM41Q8WV44 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC28.84■■■□□ 2.21
TRIM41Q8WV44 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 MXI1-205ENST00000393134 889 ntTSL 2 BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 AC005237.2-201ENST00000434368 219 ntBASIC28.83■■■□□ 2.21
TRIM41Q8WV44 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 ARL16-210ENST00000574938 751 ntTSL 2 BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 IGHV3-72-202ENST00000621503 303 ntBASIC28.83■■■□□ 2.21
TRIM41Q8WV44 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TRIM41Q8WV44 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 USB1-203ENST00000539737 1212 ntTSL 2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 IGHV3OR16-16-201ENST00000563644 343 ntBASIC28.82■■■□□ 2.2
TRIM41Q8WV44 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM41Q8WV44 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 AC141586.5-201ENST00000624546 2050 ntBASIC28.81■■■□□ 2.2
TRIM41Q8WV44 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 AC022210.1-201ENST00000449856 793 ntBASIC28.81■■■□□ 2.2
TRIM41Q8WV44 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
TRIM41Q8WV44 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 AC069335.1-201ENST00000489972 472 ntBASIC28.8■■■□□ 2.2
TRIM41Q8WV44 AL512356.2-201ENST00000546955 174 ntBASIC28.8■■■□□ 2.2
TRIM41Q8WV44 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM41Q8WV44 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms