Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 AC092364.2-201ENST00000596710 2692 ntBASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 MIR5100-201ENST00000579544 119 ntBASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 LINC02199-201ENST00000506655 2702 ntBASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLHC1Q8NHS4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 POM121L3P-201ENST00000419331 1163 ntBASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 ABCD1P5-201ENST00000445663 754 ntBASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 HLA-A-202ENST00000376806 1854 ntBASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLHC1Q8NHS4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms