Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COL27A1Q8IZC6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
COL27A1Q8IZC6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
COL27A1Q8IZC6 CROCCP2-202ENST00000412962 2773 ntBASIC15.71■□□□□ 0.1
COL27A1Q8IZC6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 AL390961.4-201ENST00000623958 2535 ntBASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL27A1Q8IZC6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 ARSEP1-201ENST00000420443 635 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC135586.1-201ENST00000539323 574 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 SNX29P1-201ENST00000548357 1007 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC092053.1-201ENST00000605787 1936 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC138969.3-201ENST00000546612 1459 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC138932.2-201ENST00000548268 1459 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC126755.4-201ENST00000549796 1459 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 KRT8P39-201ENST00000396270 1433 ntBASIC15.69■□□□□ 0.1
COL27A1Q8IZC6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 AC044860.1-202ENST00000559481 777 ntBASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COL27A1Q8IZC6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms