Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 AC011558.1-201ENST00000623459 338 ntBASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 AC006538.1-201ENST00000567905 1585 ntBASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM42Q8IWZ5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 RNF152P1-201ENST00000397754 604 ntBASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 TSPY5P-201ENST00000426936 936 ntBASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AC007967.3-201ENST00000434308 558 ntBASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AL023973.1-201ENST00000624619 620 ntBASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM42Q8IWZ5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.96■□□□□ 0.3
TRIM42Q8IWZ5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 KRT18P35-201ENST00000510488 1269 ntBASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 STK25P1-201ENST00000585406 838 ntBASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 AL445228.2-201ENST00000605589 952 ntBASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM42Q8IWZ5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms