Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 AC008741.2-201ENST00000612792 3115 ntBASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 HCG4P8-203ENST00000443049 980 ntBASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 MTDHP3-201ENST00000594186 672 ntBASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 AL021920.2-201ENST00000624828 1351 ntBASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 NCF1C-201ENST00000438382 1427 ntBASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 AL356309.3-201ENST00000624132 1934 ntBASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC83Q8IWF9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 MIR3652-201ENST00000579335 131 ntBASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 TERC-201ENST00000602385 541 ntBASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC83Q8IWF9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 LINC02199-201ENST00000506655 2702 ntBASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 KRT18P31-201ENST00000506277 1292 ntBASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 AL139288.1-201ENST00000623748 933 ntBASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms