Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 AC006538.1-201ENST00000567905 1585 ntBASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 PAUPAR-201ENST00000630360 2965 ntBASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRTM1Q86UE6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 KLF4P1-201ENST00000412782 1185 ntBASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 TSPY5P-201ENST00000426936 936 ntBASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 AD001527.2-201ENST00000622994 785 ntBASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 AC073508.3-201ENST00000619697 1419 ntBASIC14.75□□□□□ -0.05
LRRTM1Q86UE6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 TERF1P1-201ENST00000311003 1181 ntBASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 AC113347.1-201ENST00000413321 391 ntBASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 AC005052.1-201ENST00000625181 2492 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms