Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 AC079328.2-201ENST00000561241 3354 ntBASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 AC009078.2-202ENST00000463353 338 ntBASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 MIR4492-201ENST00000581627 80 ntBASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 AC013467.2-201ENST00000605472 835 ntBASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF9Q5VWM5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 SLC25A6P4-201ENST00000586535 553 ntBASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 SLC22A20-204ENST00000530038 1673 ntBASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF9Q5VWM5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 AL671710.1-201ENST00000610245 2349 ntBASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 AL031284.1-201ENST00000419297 478 ntBASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 PMS2P1-201ENST00000431037 1228 ntBASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 MPDU1-223ENST00000582151 728 ntBASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 AC117500.6-201ENST00000624871 588 ntBASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF9Q5VWM5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms