Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 RN7SL589P-201ENST00000481268 310 ntBASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 AC013467.2-201ENST00000605472 835 ntBASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DCAF4L1Q3SXM0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DCAF4L1Q3SXM0 AC092068.3-201ENST00000587894 2016 ntBASIC18.27■□□□□ 0.51
DCAF4L1Q3SXM0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DCAF4L1Q3SXM0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DCAF4L1Q3SXM0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 AKAP8P1-201ENST00000434743 1349 ntBASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 AC092474.2-201ENST00000424288 719 ntBASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 AP002490.2-201ENST00000524791 560 ntBASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 AC004835.2-201ENST00000603762 682 ntBASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 AC026120.1-201ENST00000611536 926 ntBASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCAF4L1Q3SXM0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 AC006277.1-201ENST00000624348 1610 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 SPDYE11-202ENST00000450699 704 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 SPDYE9P-201ENST00000570642 692 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 AC022145.2-201ENST00000598203 171 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 SPDYE10P-202ENST00000612005 668 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 SPDYE8P-202ENST00000612377 668 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCAF4L1Q3SXM0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 AL645608.8-201ENST00000606034 2086 ntBASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
DCAF4L1Q3SXM0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms