Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFX7Q2KHR2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 AC106886.4-201ENST00000623557 2502 ntBASIC20.36■□□□□ 0.85
RFX7Q2KHR2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 AC093028.1-201ENST00000622998 982 ntBASIC20.36■□□□□ 0.85
RFX7Q2KHR2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 LTB4R2-202ENST00000528054 3092 ntBASIC20.36■□□□□ 0.85
RFX7Q2KHR2 AGGF1P2-201ENST00000426656 2106 ntBASIC20.36■□□□□ 0.85
RFX7Q2KHR2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFX7Q2KHR2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 AC140658.5-201ENST00000438532 169 ntBASIC20.35■□□□□ 0.85
RFX7Q2KHR2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 AC087641.1-201ENST00000557561 1021 ntBASIC20.35■□□□□ 0.85
RFX7Q2KHR2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 AC012313.1-201ENST00000593393 3059 ntBASIC20.35■□□□□ 0.85
RFX7Q2KHR2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFX7Q2KHR2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AC093520.2-201ENST00000561830 333 ntBASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 CYP2A7P1-201ENST00000595391 815 ntBASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 HLA-A-202ENST00000376806 1854 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms