Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 LINC00895-201ENST00000629028 1637 ntBASIC18.38■□□□□ 0.53
CDC42EP1Q00587 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 AC018470.1-201ENST00000624790 3129 ntBASIC18.38■□□□□ 0.53
CDC42EP1Q00587 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 MIR346-201ENST00000362234 95 ntBASIC18.38■□□□□ 0.53
CDC42EP1Q00587 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 KRT18P34-201ENST00000488218 1270 ntBASIC18.38■□□□□ 0.53
CDC42EP1Q00587 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 AC093028.1-201ENST00000622998 982 ntBASIC18.38■□□□□ 0.53
CDC42EP1Q00587 AL139011.1-202ENST00000642063 584 ntBASIC18.38■□□□□ 0.53
CDC42EP1Q00587 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC42EP1Q00587 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 AC109322.1-201ENST00000524499 1264 ntBASIC18.37■□□□□ 0.53
CDC42EP1Q00587 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC42EP1Q00587 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.36■□□□□ 0.53
CDC42EP1Q00587 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 HMGN1P19-201ENST00000436976 333 ntBASIC18.36■□□□□ 0.53
CDC42EP1Q00587 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 UXT-AS1-201ENST00000590504 1525 ntBASIC18.36■□□□□ 0.53
CDC42EP1Q00587 AC027307.2-201ENST00000591252 911 ntBASIC18.36■□□□□ 0.53
CDC42EP1Q00587 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42EP1Q00587 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 AC092053.1-201ENST00000605787 1936 ntBASIC18.35■□□□□ 0.53
CDC42EP1Q00587 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms