Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 AP002414.1-201ENST00000391405 1147 ntBASIC16.71■□□□□ 0.27
CDKL1Q00532 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.71■□□□□ 0.27
CDKL1Q00532 FGFR3P6-201ENST00000457012 610 ntBASIC16.71■□□□□ 0.27
CDKL1Q00532 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.71■□□□□ 0.27
CDKL1Q00532 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 LINC01711-201ENST00000598340 967 ntBASIC16.71■□□□□ 0.27
CDKL1Q00532 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.71■□□□□ 0.27
CDKL1Q00532 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDKL1Q00532 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDKL1Q00532 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.71■□□□□ 0.27
CDKL1Q00532 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDKL1Q00532 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CDKL1Q00532 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDKL1Q00532 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDKL1Q00532 AL590787.1-201ENST00000568856 1315 ntBASIC16.7■□□□□ 0.26
CDKL1Q00532 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CDKL1Q00532 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.7■□□□□ 0.26
CDKL1Q00532 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.7■□□□□ 0.26
CDKL1Q00532 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.7■□□□□ 0.26
CDKL1Q00532 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDKL1Q00532 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.7■□□□□ 0.26
CDKL1Q00532 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 AC008608.2-201ENST00000606089 416 ntBASIC16.7■□□□□ 0.26
CDKL1Q00532 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.7■□□□□ 0.26
CDKL1Q00532 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 AC092068.3-201ENST00000587894 2016 ntBASIC16.7■□□□□ 0.26
CDKL1Q00532 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDKL1Q00532 TUBB8P12-201ENST00000308911 1335 ntBASIC16.7■□□□□ 0.26
CDKL1Q00532 TUBB7P-202ENST00000428444 1305 ntBASIC16.7■□□□□ 0.26
CDKL1Q00532 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 TUBB8P7-204ENST00000567960 1332 ntBASIC16.7■□□□□ 0.26
CDKL1Q00532 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDKL1Q00532 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDKL1Q00532 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKL1Q00532 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKL1Q00532 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDKL1Q00532 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKL1Q00532 AC005915.1-201ENST00000624912 2018 ntBASIC16.69■□□□□ 0.26
CDKL1Q00532 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.69■□□□□ 0.26
CDKL1Q00532 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDKL1Q00532 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.69■□□□□ 0.26
CDKL1Q00532 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 SAPCD2P3-201ENST00000455031 850 ntBASIC16.69■□□□□ 0.26
CDKL1Q00532 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKL1Q00532 SCARNA2-201ENST00000458748 420 ntBASIC16.69■□□□□ 0.26
CDKL1Q00532 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDKL1Q00532 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.69■□□□□ 0.26
CDKL1Q00532 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKL1Q00532 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKL1Q00532 MST1L-201ENST00000442552 2185 ntBASIC16.69■□□□□ 0.26
CDKL1Q00532 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKL1Q00532 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKL1Q00532 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms