Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.51■□□□□ 0.23
AP1S2P56377 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
AP1S2P56377 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S2P56377 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.51■□□□□ 0.23
AP1S2P56377 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP1S2P56377 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S2P56377 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.51■□□□□ 0.23
AP1S2P56377 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 RNF216P1-203ENST00000404404 2427 ntBASIC16.5■□□□□ 0.23
AP1S2P56377 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S2P56377 AL391256.1-201ENST00000443260 1855 ntBASIC16.5■□□□□ 0.23
AP1S2P56377 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
AP1S2P56377 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
AP1S2P56377 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 AP002469.2-201ENST00000531724 424 ntBASIC16.5■□□□□ 0.23
AP1S2P56377 AL160237.2-201ENST00000556165 472 ntBASIC16.5■□□□□ 0.23
AP1S2P56377 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.5■□□□□ 0.23
AP1S2P56377 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 AC104692.2-201ENST00000603054 253 ntBASIC16.5■□□□□ 0.23
AP1S2P56377 AC005593.1-201ENST00000624894 515 ntBASIC16.5■□□□□ 0.23
AP1S2P56377 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S2P56377 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S2P56377 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
AP1S2P56377 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S2P56377 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S2P56377 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
AP1S2P56377 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 AL139384.1-201ENST00000612143 3047 ntBASIC16.49■□□□□ 0.23
AP1S2P56377 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.49■□□□□ 0.23
AP1S2P56377 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.49■□□□□ 0.23
AP1S2P56377 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 IGHV3-65-201ENST00000523210 341 ntBASIC16.49■□□□□ 0.23
AP1S2P56377 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S2P56377 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 AC091167.2-201ENST00000579581 588 ntBASIC16.49■□□□□ 0.23
AP1S2P56377 REXO1L3P-201ENST00000622202 1288 ntBASIC16.49■□□□□ 0.23
AP1S2P56377 FAM215A-202ENST00000632077 792 ntBASIC16.49■□□□□ 0.23
AP1S2P56377 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S2P56377 AL139011.1-202ENST00000642063 584 ntBASIC16.49■□□□□ 0.23
AP1S2P56377 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S2P56377 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S2P56377 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S2P56377 FLJ38576-201ENST00000623820 2459 ntBASIC16.48■□□□□ 0.23
AP1S2P56377 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.48■□□□□ 0.23
AP1S2P56377 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms