Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.32■□□□□ 0.04
SUMO3P55854 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SUMO3P55854 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 AL645728.1-201ENST00000366221 2101 ntBASIC15.32■□□□□ 0.04
SUMO3P55854 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SUMO3P55854 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 SLC22A20-204ENST00000530038 1673 ntBASIC15.32■□□□□ 0.04
SUMO3P55854 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SUMO3P55854 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SUMO3P55854 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 PMS2P1-201ENST00000431037 1228 ntBASIC15.31■□□□□ 0.04
SUMO3P55854 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.31■□□□□ 0.04
SUMO3P55854 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.31■□□□□ 0.04
SUMO3P55854 AC106730.1-201ENST00000566722 1090 ntBASIC15.31■□□□□ 0.04
SUMO3P55854 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.31■□□□□ 0.04
SUMO3P55854 MIR4515-201ENST00000584082 81 ntBASIC15.31■□□□□ 0.04
SUMO3P55854 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 CYP2A7P1-201ENST00000595391 815 ntBASIC15.31■□□□□ 0.04
SUMO3P55854 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
SUMO3P55854 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
SUMO3P55854 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.31■□□□□ 0.04
SUMO3P55854 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SUMO3P55854 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SUMO3P55854 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.3■□□□□ 0.04
SUMO3P55854 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SUMO3P55854 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.3■□□□□ 0.04
SUMO3P55854 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SUMO3P55854 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.3■□□□□ 0.04
SUMO3P55854 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.3■□□□□ 0.04
SUMO3P55854 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SUMO3P55854 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SUMO3P55854 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SUMO3P55854 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 AC012569.1-201ENST00000591191 1524 ntBASIC15.3■□□□□ 0.04
SUMO3P55854 AC064836.3-201ENST00000607928 673 ntBASIC15.3■□□□□ 0.04
SUMO3P55854 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.3■□□□□ 0.04
SUMO3P55854 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.3■□□□□ 0.04
SUMO3P55854 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.3■□□□□ 0.04
SUMO3P55854 AC078925.2-201ENST00000624013 1973 ntBASIC15.3■□□□□ 0.04
SUMO3P55854 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 AC010507.1-201ENST00000633895 436 ntBASIC15.3■□□□□ 0.04
SUMO3P55854 AC007064.4-201ENST00000637740 555 ntBASIC15.3■□□□□ 0.04
SUMO3P55854 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SUMO3P55854 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SUMO3P55854 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SUMO3P55854 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms