Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CACNB3P54284 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.95■□□□□ 0.78
CACNB3P54284 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.95■□□□□ 0.78
CACNB3P54284 MIR4492-201ENST00000581627 80 ntBASIC19.95■□□□□ 0.78
CACNB3P54284 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.95■□□□□ 0.78
CACNB3P54284 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNB3P54284 AL035252.4-201ENST00000624174 288 ntBASIC19.95■□□□□ 0.78
CACNB3P54284 AC008761.3-201ENST00000624803 892 ntBASIC19.95■□□□□ 0.78
CACNB3P54284 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CACNB3P54284 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CACNB3P54284 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CACNB3P54284 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNB3P54284 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CACNB3P54284 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNB3P54284 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNB3P54284 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CACNB3P54284 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNB3P54284 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNB3P54284 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNB3P54284 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 AC142381.1-201ENST00000426099 345 ntBASIC19.94■□□□□ 0.78
CACNB3P54284 AC005034.1-201ENST00000426657 489 ntBASIC19.94■□□□□ 0.78
CACNB3P54284 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 AL512638.1-201ENST00000457493 794 ntBASIC19.94■□□□□ 0.78
CACNB3P54284 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.94■□□□□ 0.78
CACNB3P54284 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNB3P54284 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.94■□□□□ 0.78
CACNB3P54284 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CACNB3P54284 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNB3P54284 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNB3P54284 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNB3P54284 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 CROCCP2-202ENST00000412962 2773 ntBASIC19.94■□□□□ 0.78
CACNB3P54284 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CACNB3P54284 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNB3P54284 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CACNB3P54284 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.93■□□□□ 0.78
CACNB3P54284 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.93■□□□□ 0.78
CACNB3P54284 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.93■□□□□ 0.78
CACNB3P54284 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.93■□□□□ 0.78
CACNB3P54284 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.93■□□□□ 0.78
CACNB3P54284 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.93■□□□□ 0.78
CACNB3P54284 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 AC092053.1-201ENST00000605787 1936 ntBASIC19.93■□□□□ 0.78
CACNB3P54284 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 AC067852.2-201ENST00000590513 2313 ntBASIC19.93■□□□□ 0.78
CACNB3P54284 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNB3P54284 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CACNB3P54284 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNB3P54284 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms