Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.57■□□□□ 0.56
ATN1P54259 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.57■□□□□ 0.56
ATN1P54259 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATN1P54259 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
ATN1P54259 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATN1P54259 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.56■□□□□ 0.56
ATN1P54259 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ATN1P54259 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATN1P54259 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 MIR658-201ENST00000385210 100 ntBASIC18.56■□□□□ 0.56
ATN1P54259 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.56■□□□□ 0.56
ATN1P54259 AL691447.1-201ENST00000419456 387 ntBASIC18.56■□□□□ 0.56
ATN1P54259 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.56■□□□□ 0.56
ATN1P54259 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ATN1P54259 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.56■□□□□ 0.56
ATN1P54259 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.56■□□□□ 0.56
ATN1P54259 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.56■□□□□ 0.56
ATN1P54259 MIR3909-201ENST00000579518 119 ntBASIC18.56■□□□□ 0.56
ATN1P54259 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 AL391262.2-201ENST00000622466 494 ntBASIC18.56■□□□□ 0.56
ATN1P54259 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.56■□□□□ 0.56
ATN1P54259 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.56■□□□□ 0.56
ATN1P54259 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATN1P54259 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATN1P54259 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ATN1P54259 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATN1P54259 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
ATN1P54259 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 AC087499.5-201ENST00000452760 1342 ntBASIC18.55■□□□□ 0.56
ATN1P54259 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
ATN1P54259 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 AL512384.1-201ENST00000406683 331 ntBASIC18.55■□□□□ 0.56
ATN1P54259 AL035696.2-201ENST00000407941 709 ntBASIC18.55■□□□□ 0.56
ATN1P54259 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 AP006294.1-201ENST00000415407 339 ntBASIC18.55■□□□□ 0.56
ATN1P54259 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.55■□□□□ 0.56
ATN1P54259 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.55■□□□□ 0.56
ATN1P54259 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.55■□□□□ 0.56
ATN1P54259 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.55■□□□□ 0.56
ATN1P54259 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 AC105148.1-201ENST00000604961 409 ntBASIC18.55■□□□□ 0.56
ATN1P54259 AL589739.1-201ENST00000607720 493 ntBASIC18.55■□□□□ 0.56
ATN1P54259 AL844908.2-201ENST00000609461 460 ntBASIC18.55■□□□□ 0.56
ATN1P54259 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATN1P54259 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.55■□□□□ 0.56
ATN1P54259 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATN1P54259 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATN1P54259 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.54■□□□□ 0.56
ATN1P54259 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.54■□□□□ 0.56
ATN1P54259 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATN1P54259 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ATN1P54259 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.54■□□□□ 0.56
ATN1P54259 AC087289.5-201ENST00000586076 3175 ntBASIC18.54■□□□□ 0.56
ATN1P54259 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ATN1P54259 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.54■□□□□ 0.56
ATN1P54259 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ATN1P54259 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ATN1P54259 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms