Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LIMK2P53671 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LIMK2P53671 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIMK2P53671 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LIMK2P53671 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LIMK2P53671 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 OR6D1P-203ENST00000641209 4860 ntBASIC17.1■□□□□ 0.33
LIMK2P53671 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LIMK2P53671 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LIMK2P53671 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.1■□□□□ 0.33
LIMK2P53671 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
LIMK2P53671 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LIMK2P53671 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.1■□□□□ 0.33
LIMK2P53671 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.1■□□□□ 0.33
LIMK2P53671 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.1■□□□□ 0.33
LIMK2P53671 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.1■□□□□ 0.33
LIMK2P53671 OR7E14P-202ENST00000530490 1290 ntBASIC17.1■□□□□ 0.33
LIMK2P53671 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 ZNF259P1-201ENST00000407656 1365 ntBASIC17.1■□□□□ 0.33
LIMK2P53671 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
LIMK2P53671 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
LIMK2P53671 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
LIMK2P53671 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.1■□□□□ 0.33
LIMK2P53671 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIMK2P53671 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 DOC2GP-204ENST00000639052 2548 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.09■□□□□ 0.33
LIMK2P53671 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LIMK2P53671 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 AP002490.2-201ENST00000524791 560 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.09■□□□□ 0.33
LIMK2P53671 NKAPP1-205ENST00000585790 367 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 AC025062.2-201ENST00000605477 670 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.09■□□□□ 0.33
LIMK2P53671 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 TUBB8P12-201ENST00000308911 1335 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 TUBB7P-202ENST00000428444 1305 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 TUBB8P7-204ENST00000567960 1332 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LIMK2P53671 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
LIMK2P53671 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 AC148477.5-201ENST00000625164 1645 ntBASIC17.09■□□□□ 0.33
LIMK2P53671 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LIMK2P53671 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LIMK2P53671 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LIMK2P53671 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIMK2P53671 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIMK2P53671 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LIMK2P53671 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIMK2P53671 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.08■□□□□ 0.33
LIMK2P53671 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.08■□□□□ 0.33
LIMK2P53671 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.08■□□□□ 0.33
LIMK2P53671 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
LIMK2P53671 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
LIMK2P53671 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LIMK2P53671 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms