Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC018695.7-201ENST00000624587 2492 ntBASIC15.79■□□□□ 0.12
RNF144AP50876 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF144AP50876 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.79■□□□□ 0.12
RNF144AP50876 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
RNF144AP50876 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 RBM17P3-201ENST00000417687 1192 ntBASIC15.79■□□□□ 0.12
RNF144AP50876 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.79■□□□□ 0.12
RNF144AP50876 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.79■□□□□ 0.12
RNF144AP50876 AC021087.4-201ENST00000563761 564 ntBASIC15.79■□□□□ 0.12
RNF144AP50876 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF144AP50876 AL022326.1-202ENST00000641533 845 ntBASIC15.79■□□□□ 0.12
RNF144AP50876 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF144AP50876 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF144AP50876 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF144AP50876 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF144AP50876 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF144AP50876 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RNF144AP50876 GPR89P-201ENST00000407924 1495 ntBASIC15.78■□□□□ 0.12
RNF144AP50876 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF144AP50876 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 PCDH8P1-201ENST00000428983 2773 ntBASIC15.78■□□□□ 0.12
RNF144AP50876 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF144AP50876 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF144AP50876 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF144AP50876 AC079781.3-201ENST00000449110 356 ntBASIC15.78■□□□□ 0.12
RNF144AP50876 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF144AP50876 AC025062.2-201ENST00000605477 670 ntBASIC15.78■□□□□ 0.12
RNF144AP50876 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF144AP50876 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 PCDHB17P-201ENST00000539533 2393 ntBASIC15.78■□□□□ 0.12
RNF144AP50876 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF144AP50876 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF144AP50876 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF144AP50876 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF144AP50876 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF144AP50876 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF144AP50876 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.77■□□□□ 0.12
RNF144AP50876 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF144AP50876 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF144AP50876 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms