Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 AC005104.2-201ENST00000427818 678 ntBASIC19.8■□□□□ 0.76
MRE11P49959 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.8■□□□□ 0.76
MRE11P49959 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.8■□□□□ 0.76
MRE11P49959 AC124947.2-201ENST00000547118 1133 ntBASIC19.8■□□□□ 0.76
MRE11P49959 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 AC104692.2-201ENST00000603054 253 ntBASIC19.8■□□□□ 0.76
MRE11P49959 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.8■□□□□ 0.76
MRE11P49959 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
MRE11P49959 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRE11P49959 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.79■□□□□ 0.76
MRE11P49959 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.79■□□□□ 0.76
MRE11P49959 AC092329.2-201ENST00000598402 547 ntBASIC19.79■□□□□ 0.76
MRE11P49959 AC140113.3-201ENST00000605663 199 ntBASIC19.79■□□□□ 0.76
MRE11P49959 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.79■□□□□ 0.76
MRE11P49959 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRE11P49959 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MRE11P49959 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.78■□□□□ 0.76
MRE11P49959 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 LINC00167-201ENST00000530583 1419 ntBASIC19.78■□□□□ 0.76
MRE11P49959 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 PMS2P1-201ENST00000431037 1228 ntBASIC19.78■□□□□ 0.76
MRE11P49959 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.78■□□□□ 0.76
MRE11P49959 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
MRE11P49959 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms