Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CBX5P45973 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CBX5P45973 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX5P45973 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CBX5P45973 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
CBX5P45973 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 AL161772.1-201ENST00000610494 4412 ntBASIC14.66□□□□□ -0.06
CBX5P45973 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 AC006449.5-201ENST00000610658 2098 ntBASIC14.66□□□□□ -0.06
CBX5P45973 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CBX5P45973 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
CBX5P45973 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CBX5P45973 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 INGX-201ENST00000359239 846 ntBASIC14.66□□□□□ -0.06
CBX5P45973 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 MTCL1P1-201ENST00000446207 792 ntBASIC14.66□□□□□ -0.06
CBX5P45973 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX5P45973 AP002490.2-201ENST00000524791 560 ntBASIC14.66□□□□□ -0.06
CBX5P45973 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX5P45973 AL136038.4-201ENST00000603606 1261 ntBASIC14.66□□□□□ -0.06
CBX5P45973 Z99916.2-201ENST00000604037 246 ntBASIC14.66□□□□□ -0.06
CBX5P45973 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.66□□□□□ -0.06
CBX5P45973 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX5P45973 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX5P45973 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 AL391807.1-203ENST00000604392 2365 ntBASIC14.65□□□□□ -0.06
CBX5P45973 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 ECEL1P3-201ENST00000427961 737 ntBASIC14.65□□□□□ -0.06
CBX5P45973 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.65□□□□□ -0.06
CBX5P45973 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 ECEL1P2-202ENST00000465689 757 ntBASIC14.65□□□□□ -0.06
CBX5P45973 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.65□□□□□ -0.06
CBX5P45973 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 NAPSB-206ENST00000562112 1266 ntBASIC14.65□□□□□ -0.06
CBX5P45973 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.65□□□□□ -0.06
CBX5P45973 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CBX5P45973 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CBX5P45973 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms