Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.53■□□□□ 0.56
USP8P40818 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.53■□□□□ 0.56
USP8P40818 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.53■□□□□ 0.56
USP8P40818 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.53■□□□□ 0.56
USP8P40818 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.53■□□□□ 0.56
USP8P40818 AL121772.3-201ENST00000610840 674 ntBASIC18.53■□□□□ 0.56
USP8P40818 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
USP8P40818 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.53■□□□□ 0.56
USP8P40818 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.53■□□□□ 0.56
USP8P40818 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.53■□□□□ 0.56
USP8P40818 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP8P40818 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.53■□□□□ 0.56
USP8P40818 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.53■□□□□ 0.56
USP8P40818 PCDH8P1-201ENST00000428983 2773 ntBASIC18.53■□□□□ 0.56
USP8P40818 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
USP8P40818 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.52■□□□□ 0.56
USP8P40818 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 AC106886.4-201ENST00000623557 2502 ntBASIC18.52■□□□□ 0.56
USP8P40818 AC097637.2-201ENST00000624096 1997 ntBASIC18.52■□□□□ 0.56
USP8P40818 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 AP005117.1-201ENST00000584346 1413 ntBASIC18.52■□□□□ 0.56
USP8P40818 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP8P40818 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.52■□□□□ 0.56
USP8P40818 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.52■□□□□ 0.56
USP8P40818 NUS1P1-201ENST00000446295 882 ntBASIC18.52■□□□□ 0.56
USP8P40818 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.52■□□□□ 0.56
USP8P40818 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.52■□□□□ 0.56
USP8P40818 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.52■□□□□ 0.56
USP8P40818 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.52■□□□□ 0.56
USP8P40818 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP8P40818 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP8P40818 AC092068.3-201ENST00000587894 2016 ntBASIC18.52■□□□□ 0.55
USP8P40818 AC005915.1-201ENST00000624912 2018 ntBASIC18.52■□□□□ 0.55
USP8P40818 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.52■□□□□ 0.55
USP8P40818 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
USP8P40818 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP8P40818 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP8P40818 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP8P40818 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
USP8P40818 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.51■□□□□ 0.55
USP8P40818 FLJ38576-201ENST00000623820 2459 ntBASIC18.51■□□□□ 0.55
USP8P40818 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 EGFEM1P-202ENST00000431685 1563 ntBASIC18.51■□□□□ 0.55
USP8P40818 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP8P40818 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP8P40818 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.51■□□□□ 0.55
USP8P40818 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
USP8P40818 KRT18P31-201ENST00000506277 1292 ntBASIC18.51■□□□□ 0.55
USP8P40818 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.51■□□□□ 0.55
USP8P40818 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP8P40818 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP8P40818 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
USP8P40818 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
USP8P40818 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms