Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MMP8P22894 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MMP8P22894 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.79■□□□□ 0.44
MMP8P22894 PMS2P1-201ENST00000431037 1228 ntBASIC17.79■□□□□ 0.44
MMP8P22894 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.79■□□□□ 0.44
MMP8P22894 TPM4P1-201ENST00000436100 807 ntBASIC17.79■□□□□ 0.44
MMP8P22894 AC108073.2-201ENST00000464002 357 ntBASIC17.79■□□□□ 0.44
MMP8P22894 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.79■□□□□ 0.44
MMP8P22894 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.79■□□□□ 0.44
MMP8P22894 SLC25A6P4-201ENST00000586535 553 ntBASIC17.79■□□□□ 0.44
MMP8P22894 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MMP8P22894 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP8P22894 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
MMP8P22894 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP8P22894 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
MMP8P22894 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 AL353732.1-201ENST00000569618 1459 ntBASIC17.78■□□□□ 0.44
MMP8P22894 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 AC092910.1-201ENST00000482027 1129 ntBASIC17.78■□□□□ 0.44
MMP8P22894 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.78■□□□□ 0.44
MMP8P22894 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP8P22894 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.78■□□□□ 0.44
MMP8P22894 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
MMP8P22894 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.78■□□□□ 0.44
MMP8P22894 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.78■□□□□ 0.44
MMP8P22894 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP8P22894 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP8P22894 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP8P22894 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP8P22894 PCDHB19P-201ENST00000570871 2371 ntBASIC17.77■□□□□ 0.44
MMP8P22894 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.77■□□□□ 0.44
MMP8P22894 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
MMP8P22894 MRPL20P1-201ENST00000400819 433 ntBASIC17.77■□□□□ 0.44
MMP8P22894 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 AC009078.2-202ENST00000463353 338 ntBASIC17.77■□□□□ 0.44
MMP8P22894 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.77■□□□□ 0.44
MMP8P22894 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 AC005412.3-201ENST00000580309 715 ntBASIC17.77■□□□□ 0.44
MMP8P22894 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.77■□□□□ 0.44
MMP8P22894 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 AC004790.2-201ENST00000623588 572 ntBASIC17.77■□□□□ 0.44
MMP8P22894 AC116407.3-201ENST00000623905 1129 ntBASIC17.77■□□□□ 0.44
MMP8P22894 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP8P22894 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.77■□□□□ 0.44
MMP8P22894 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP8P22894 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MMP8P22894 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP8P22894 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MMP8P22894 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms