Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCG2P13521 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCG2P13521 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.47■□□□□ 0.71
SCG2P13521 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCG2P13521 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCG2P13521 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.47■□□□□ 0.71
SCG2P13521 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.46■□□□□ 0.71
SCG2P13521 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SCG2P13521 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.46■□□□□ 0.71
SCG2P13521 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.46■□□□□ 0.71
SCG2P13521 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.46■□□□□ 0.71
SCG2P13521 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SCG2P13521 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCG2P13521 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SCG2P13521 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
SCG2P13521 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
SCG2P13521 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SCG2P13521 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.45■□□□□ 0.7
SCG2P13521 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SCG2P13521 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SCG2P13521 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCG2P13521 KRT18P3-201ENST00000451602 1288 ntBASIC19.45■□□□□ 0.7
SCG2P13521 AL513480.1-201ENST00000451731 511 ntBASIC19.45■□□□□ 0.7
SCG2P13521 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.45■□□□□ 0.7
SCG2P13521 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.45■□□□□ 0.7
SCG2P13521 AC018845.2-201ENST00000568326 409 ntBASIC19.45■□□□□ 0.7
SCG2P13521 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCG2P13521 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SCG2P13521 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.45■□□□□ 0.7
SCG2P13521 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.45■□□□□ 0.7
SCG2P13521 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SCG2P13521 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG2P13521 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCG2P13521 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SCG2P13521 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCG2P13521 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG2P13521 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 BX842568.4-201ENST00000421222 227 ntBASIC19.44■□□□□ 0.7
SCG2P13521 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.44■□□□□ 0.7
SCG2P13521 RNA5SP416-201ENST00000516838 111 ntBASIC19.44■□□□□ 0.7
SCG2P13521 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
SCG2P13521 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SCG2P13521 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCG2P13521 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCG2P13521 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SCG2P13521 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG2P13521 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 NKILA-202ENST00000614771 2598 ntBASIC19.43■□□□□ 0.7
SCG2P13521 AGGF1P2-201ENST00000426656 2106 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms