Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL11A1P12107 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.01■□□□□ 0.63
COL11A1P12107 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.01■□□□□ 0.63
COL11A1P12107 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.01■□□□□ 0.63
COL11A1P12107 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.01■□□□□ 0.63
COL11A1P12107 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL11A1P12107 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL11A1P12107 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL11A1P12107 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL11A1P12107 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 KRT8P39-201ENST00000396270 1433 ntBASIC19■□□□□ 0.63
COL11A1P12107 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19■□□□□ 0.63
COL11A1P12107 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 RN7SL692P-201ENST00000464677 288 ntBASIC19■□□□□ 0.63
COL11A1P12107 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19■□□□□ 0.63
COL11A1P12107 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19■□□□□ 0.63
COL11A1P12107 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 AC012645.4-201ENST00000610691 1061 ntBASIC19■□□□□ 0.63
COL11A1P12107 GGT4P-201ENST00000623672 1708 ntBASIC19■□□□□ 0.63
COL11A1P12107 AC025048.6-201ENST00000634326 1161 ntBASIC19■□□□□ 0.63
COL11A1P12107 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 GOLGA2P9-201ENST00000596977 1937 ntBASIC19■□□□□ 0.63
COL11A1P12107 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL11A1P12107 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19■□□□□ 0.63
COL11A1P12107 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
COL11A1P12107 AC009477.1-201ENST00000452936 217 ntBASIC19■□□□□ 0.63
COL11A1P12107 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19■□□□□ 0.63
COL11A1P12107 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19■□□□□ 0.63
COL11A1P12107 WASH4P-201ENST00000564273 1246 ntBASIC19■□□□□ 0.63
COL11A1P12107 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL11A1P12107 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 AC006277.1-201ENST00000624348 1610 ntBASIC18.99■□□□□ 0.63
COL11A1P12107 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 AF228730.6-201ENST00000641497 218 ntBASIC18.99■□□□□ 0.63
COL11A1P12107 AC084121.3-201ENST00000641716 218 ntBASIC18.99■□□□□ 0.63
COL11A1P12107 AC105233.6-201ENST00000642093 218 ntBASIC18.99■□□□□ 0.63
COL11A1P12107 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.99■□□□□ 0.63
COL11A1P12107 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL11A1P12107 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
COL11A1P12107 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.99■□□□□ 0.63
COL11A1P12107 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL11A1P12107 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL11A1P12107 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL11A1P12107 AC139713.2-201ENST00000641328 2723 ntBASIC18.98■□□□□ 0.63
COL11A1P12107 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL11A1P12107 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.98■□□□□ 0.63
COL11A1P12107 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.98■□□□□ 0.63
COL11A1P12107 AP005018.1-201ENST00000525475 301 ntBASIC18.98■□□□□ 0.63
COL11A1P12107 AL132655.2-201ENST00000596276 594 ntBASIC18.98■□□□□ 0.63
COL11A1P12107 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.98■□□□□ 0.63
COL11A1P12107 SPTSSB-204ENST00000617024 1292 ntBASIC18.98■□□□□ 0.63
COL11A1P12107 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL11A1P12107 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL11A1P12107 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.98■□□□□ 0.63
COL11A1P12107 AL645608.8-201ENST00000606034 2086 ntBASIC18.98■□□□□ 0.63
COL11A1P12107 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.98■□□□□ 0.63
COL11A1P12107 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.98■□□□□ 0.63
COL11A1P12107 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
COL11A1P12107 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL11A1P12107 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL11A1P12107 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL11A1P12107 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.97■□□□□ 0.63
COL11A1P12107 AL353705.2-201ENST00000428243 662 ntBASIC18.97■□□□□ 0.63
COL11A1P12107 AC093724.1-201ENST00000448659 1027 ntBASIC18.97■□□□□ 0.63
COL11A1P12107 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.97■□□□□ 0.63
COL11A1P12107 INGX-202ENST00000489074 768 ntBASIC18.97■□□□□ 0.63
COL11A1P12107 TERF1P3-201ENST00000505638 1227 ntBASIC18.97■□□□□ 0.63
COL11A1P12107 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.97■□□□□ 0.63
COL11A1P12107 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL11A1P12107 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.97■□□□□ 0.63
COL11A1P12107 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
COL11A1P12107 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL11A1P12107 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.97■□□□□ 0.63
COL11A1P12107 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms