Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.61■□□□□ 0.09
THBS1P07996 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 SAPCD2P3-201ENST00000455031 850 ntBASIC15.61■□□□□ 0.09
THBS1P07996 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.61■□□□□ 0.09
THBS1P07996 AC009078.2-202ENST00000463353 338 ntBASIC15.61■□□□□ 0.09
THBS1P07996 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.61■□□□□ 0.09
THBS1P07996 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.61■□□□□ 0.09
THBS1P07996 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.61■□□□□ 0.09
THBS1P07996 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 AC006538.1-201ENST00000567905 1585 ntBASIC15.61■□□□□ 0.09
THBS1P07996 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.61■□□□□ 0.09
THBS1P07996 AC006277.1-201ENST00000624348 1610 ntBASIC15.61■□□□□ 0.09
THBS1P07996 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
THBS1P07996 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 AC092171.3-201ENST00000610122 2651 ntBASIC15.6■□□□□ 0.09
THBS1P07996 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 AP000347.1-202ENST00000435868 847 ntBASIC15.6■□□□□ 0.09
THBS1P07996 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.6■□□□□ 0.09
THBS1P07996 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.6■□□□□ 0.09
THBS1P07996 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.6■□□□□ 0.09
THBS1P07996 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.6■□□□□ 0.09
THBS1P07996 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
THBS1P07996 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.6■□□□□ 0.09
THBS1P07996 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.59■□□□□ 0.09
THBS1P07996 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 AKR1C7P-201ENST00000305623 895 ntBASIC15.59■□□□□ 0.09
THBS1P07996 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 AC079781.3-201ENST00000449110 356 ntBASIC15.59■□□□□ 0.09
THBS1P07996 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.59■□□□□ 0.09
THBS1P07996 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.59■□□□□ 0.09
THBS1P07996 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.59■□□□□ 0.09
THBS1P07996 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
THBS1P07996 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms