Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSDP07339 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 AC125634.1-201ENST00000438758 1403 ntBASIC14.12□□□□□ -0.15
CTSDP07339 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.12□□□□□ -0.15
CTSDP07339 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSDP07339 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CTSDP07339 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.12□□□□□ -0.15
CTSDP07339 TSPY26P-202ENST00000565928 3884 ntBASIC14.12□□□□□ -0.15
CTSDP07339 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTSDP07339 LINC00895-201ENST00000629028 1637 ntBASIC14.12□□□□□ -0.15
CTSDP07339 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CTSDP07339 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 AC092597.1-201ENST00000487352 616 ntBASIC14.11□□□□□ -0.15
CTSDP07339 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 AL441883.1-201ENST00000566170 1045 ntBASIC14.11□□□□□ -0.15
CTSDP07339 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.11□□□□□ -0.15
CTSDP07339 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 AC145285.6-201ENST00000604632 637 ntBASIC14.11□□□□□ -0.15
CTSDP07339 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CTSDP07339 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.11□□□□□ -0.15
CTSDP07339 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.11□□□□□ -0.15
CTSDP07339 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CTSDP07339 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CTSDP07339 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 HYMAI-201ENST00000635591 3347 ntBASIC14.1□□□□□ -0.15
CTSDP07339 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 PKD1P5-201ENST00000532415 10291 ntBASIC14.1□□□□□ -0.15
CTSDP07339 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 AC003669.1-201ENST00000334569 611 ntBASIC14.1□□□□□ -0.15
CTSDP07339 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.1□□□□□ -0.15
CTSDP07339 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.1□□□□□ -0.15
CTSDP07339 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.1□□□□□ -0.15
CTSDP07339 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms