Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 AC134043.2-201ENST00000624206 2238 ntBASIC17.07■□□□□ 0.32
APODP05090 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
APODP05090 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APODP05090 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.07■□□□□ 0.32
APODP05090 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.07■□□□□ 0.32
APODP05090 COX20P2-201ENST00000452636 358 ntBASIC17.07■□□□□ 0.32
APODP05090 IGHV3-42-201ENST00000520410 361 ntBASIC17.07■□□□□ 0.32
APODP05090 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.07■□□□□ 0.32
APODP05090 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
APODP05090 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APODP05090 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.07■□□□□ 0.32
APODP05090 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.07■□□□□ 0.32
APODP05090 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.07■□□□□ 0.32
APODP05090 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.07■□□□□ 0.32
APODP05090 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.07■□□□□ 0.32
APODP05090 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
APODP05090 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
APODP05090 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
APODP05090 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
APODP05090 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.07■□□□□ 0.32
APODP05090 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.07■□□□□ 0.32
APODP05090 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.06■□□□□ 0.32
APODP05090 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.06■□□□□ 0.32
APODP05090 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
APODP05090 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.06■□□□□ 0.32
APODP05090 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.06■□□□□ 0.32
APODP05090 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
APODP05090 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.06■□□□□ 0.32
APODP05090 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.06■□□□□ 0.32
APODP05090 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.06■□□□□ 0.32
APODP05090 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.06■□□□□ 0.32
APODP05090 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.06■□□□□ 0.32
APODP05090 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.06■□□□□ 0.32
APODP05090 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
APODP05090 AC138761.1-201ENST00000584393 385 ntBASIC17.06■□□□□ 0.32
APODP05090 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.06■□□□□ 0.32
APODP05090 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.06■□□□□ 0.32
APODP05090 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.06■□□□□ 0.32
APODP05090 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APODP05090 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
APODP05090 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APODP05090 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.05■□□□□ 0.32
APODP05090 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APODP05090 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
APODP05090 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
APODP05090 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 MIR346-201ENST00000362234 95 ntBASIC17.05■□□□□ 0.32
APODP05090 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
APODP05090 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.05■□□□□ 0.32
APODP05090 TREML5P-201ENST00000421694 576 ntBASIC17.05■□□□□ 0.32
APODP05090 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.05■□□□□ 0.32
APODP05090 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.05■□□□□ 0.32
APODP05090 KRT18P34-201ENST00000488218 1270 ntBASIC17.05■□□□□ 0.32
APODP05090 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.05■□□□□ 0.32
APODP05090 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.05■□□□□ 0.32
APODP05090 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.05■□□□□ 0.32
APODP05090 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.05■□□□□ 0.32
APODP05090 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
APODP05090 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.05■□□□□ 0.32
APODP05090 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.05■□□□□ 0.32
APODP05090 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.05■□□□□ 0.32
APODP05090 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APODP05090 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APODP05090 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms