Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 PCDHB17P-201ENST00000539533 2393 ntBASIC16.48■□□□□ 0.23
KRT6BP04259 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT6BP04259 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT6BP04259 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT6BP04259 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT6BP04259 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 AC018695.7-201ENST00000624587 2492 ntBASIC16.47■□□□□ 0.23
KRT6BP04259 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KRT6BP04259 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT6BP04259 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT6BP04259 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT6BP04259 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
KRT6BP04259 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KRT6BP04259 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 PRYP5-201ENST00000451909 266 ntBASIC16.46■□□□□ 0.23
KRT6BP04259 AC132008.2-207ENST00000454517 770 ntBASIC16.46■□□□□ 0.23
KRT6BP04259 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT6BP04259 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT6BP04259 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRT6BP04259 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
KRT6BP04259 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT6BP04259 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT6BP04259 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6BP04259 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6BP04259 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6BP04259 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT6BP04259 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.46■□□□□ 0.22
KRT6BP04259 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.46■□□□□ 0.22
KRT6BP04259 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6BP04259 AL603756.1-201ENST00000606511 2163 ntBASIC16.45■□□□□ 0.22
KRT6BP04259 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRT6BP04259 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6BP04259 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT6BP04259 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.45■□□□□ 0.22
KRT6BP04259 AP001269.4-201ENST00000609611 512 ntBASIC16.45■□□□□ 0.22
KRT6BP04259 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT6BP04259 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRT6BP04259 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT6BP04259 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT6BP04259 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms