Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VTNP04004 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VTNP04004 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VTNP04004 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.5■□□□□ 0.55
VTNP04004 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTNP04004 AC108860.2-201ENST00000562760 2183 ntBASIC18.49■□□□□ 0.55
VTNP04004 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.49■□□□□ 0.55
VTNP04004 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
VTNP04004 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.49■□□□□ 0.55
VTNP04004 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.49■□□□□ 0.55
VTNP04004 KRT18P32-201ENST00000424695 1287 ntBASIC18.49■□□□□ 0.55
VTNP04004 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.49■□□□□ 0.55
VTNP04004 AC025678.2-201ENST00000562061 970 ntBASIC18.49■□□□□ 0.55
VTNP04004 MIR4492-201ENST00000581627 80 ntBASIC18.49■□□□□ 0.55
VTNP04004 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.49■□□□□ 0.55
VTNP04004 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.49■□□□□ 0.55
VTNP04004 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
VTNP04004 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 WASH6P-202ENST00000359512 1437 ntBASIC18.49■□□□□ 0.55
VTNP04004 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VTNP04004 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.49■□□□□ 0.55
VTNP04004 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VTNP04004 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.48■□□□□ 0.55
VTNP04004 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.48■□□□□ 0.55
VTNP04004 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.48■□□□□ 0.55
VTNP04004 AC139713.2-201ENST00000641328 2723 ntBASIC18.48■□□□□ 0.55
VTNP04004 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.48■□□□□ 0.55
VTNP04004 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.48■□□□□ 0.55
VTNP04004 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.48■□□□□ 0.55
VTNP04004 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.48■□□□□ 0.55
VTNP04004 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.48■□□□□ 0.55
VTNP04004 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.48■□□□□ 0.55
VTNP04004 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.48■□□□□ 0.55
VTNP04004 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.48■□□□□ 0.55
VTNP04004 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.48■□□□□ 0.55
VTNP04004 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.48■□□□□ 0.55
VTNP04004 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VTNP04004 AC016027.1-202ENST00000607927 1699 ntBASIC18.47■□□□□ 0.55
VTNP04004 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VTNP04004 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VTNP04004 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VTNP04004 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.47■□□□□ 0.55
VTNP04004 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms