Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND1P03886 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 MYCLP1-201ENST00000372451 1075 ntBASIC16.05■□□□□ 0.16
MT-ND1P03886 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND1P03886 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.05■□□□□ 0.16
MT-ND1P03886 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND1P03886 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.05■□□□□ 0.16
MT-ND1P03886 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.05■□□□□ 0.16
MT-ND1P03886 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.05■□□□□ 0.16
MT-ND1P03886 AL390719.2-201ENST00000606993 987 ntBASIC16.05■□□□□ 0.16
MT-ND1P03886 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.05■□□□□ 0.16
MT-ND1P03886 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MT-ND1P03886 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND1P03886 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND1P03886 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND1P03886 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
MT-ND1P03886 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MT-ND1P03886 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND1P03886 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND1P03886 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
MT-ND1P03886 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND1P03886 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND1P03886 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND1P03886 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND1P03886 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MT-ND1P03886 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 AC144831.1-201ENST00000573312 2656 ntBASIC16.04■□□□□ 0.16
MT-ND1P03886 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
MT-ND1P03886 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND1P03886 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND1P03886 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND1P03886 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 Z83836.1-201ENST00000624605 1642 ntBASIC16.03■□□□□ 0.16
MT-ND1P03886 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND1P03886 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND1P03886 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND1P03886 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms