Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.97■□□□□ 0.31
CBX6O95503 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBX6O95503 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.97■□□□□ 0.31
CBX6O95503 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CBX6O95503 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CBX6O95503 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBX6O95503 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.97■□□□□ 0.31
CBX6O95503 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.97■□□□□ 0.31
CBX6O95503 AL365203.3-201ENST00000609742 2057 ntBASIC16.97■□□□□ 0.31
CBX6O95503 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBX6O95503 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.96■□□□□ 0.31
CBX6O95503 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.96■□□□□ 0.31
CBX6O95503 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.96■□□□□ 0.31
CBX6O95503 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.96■□□□□ 0.31
CBX6O95503 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.96■□□□□ 0.31
CBX6O95503 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.96■□□□□ 0.31
CBX6O95503 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 AC004263.2-201ENST00000617183 678 ntBASIC16.96■□□□□ 0.31
CBX6O95503 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.96■□□□□ 0.31
CBX6O95503 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CBX6O95503 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CBX6O95503 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBX6O95503 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.96■□□□□ 0.3
CBX6O95503 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CBX6O95503 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CBX6O95503 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CBX6O95503 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.96■□□□□ 0.3
CBX6O95503 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CBX6O95503 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.96■□□□□ 0.3
CBX6O95503 KRT18P1-202ENST00000452408 1331 ntBASIC16.96■□□□□ 0.3
CBX6O95503 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CBX6O95503 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX6O95503 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CBX6O95503 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 AL022342.1-201ENST00000400363 863 ntBASIC16.95■□□□□ 0.3
CBX6O95503 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.95■□□□□ 0.3
CBX6O95503 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 AC091304.2-201ENST00000564639 760 ntBASIC16.95■□□□□ 0.3
CBX6O95503 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.95■□□□□ 0.3
CBX6O95503 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX6O95503 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 AL732292.2-201ENST00000609649 430 ntBASIC16.95■□□□□ 0.3
CBX6O95503 AL121772.3-201ENST00000610840 674 ntBASIC16.95■□□□□ 0.3
CBX6O95503 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 AC079602.3-201ENST00000623931 403 ntBASIC16.95■□□□□ 0.3
CBX6O95503 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX6O95503 AC144831.1-201ENST00000573312 2656 ntBASIC16.95■□□□□ 0.3
CBX6O95503 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CBX6O95503 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.95■□□□□ 0.3
CBX6O95503 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CBX6O95503 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CBX6O95503 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CBX6O95503 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CBX6O95503 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CBX6O95503 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms