Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.98□□□□□ -0.01
KDM4BO94953 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KDM4BO94953 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KDM4BO94953 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.98□□□□□ -0.01
KDM4BO94953 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDM4BO94953 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KDM4BO94953 AC097374.2-201ENST00000618617 1306 ntBASIC14.97□□□□□ -0.01
KDM4BO94953 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.97□□□□□ -0.01
KDM4BO94953 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.97□□□□□ -0.01
KDM4BO94953 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.97□□□□□ -0.01
KDM4BO94953 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KDM4BO94953 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.97□□□□□ -0.01
KDM4BO94953 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KDM4BO94953 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.97□□□□□ -0.01
KDM4BO94953 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.97□□□□□ -0.01
KDM4BO94953 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 AC083849.1-201ENST00000615227 514 ntBASIC14.97□□□□□ -0.01
KDM4BO94953 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KDM4BO94953 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.97□□□□□ -0.01
KDM4BO94953 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.97□□□□□ -0.01
KDM4BO94953 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDM4BO94953 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
KDM4BO94953 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.96□□□□□ -0.01
KDM4BO94953 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
KDM4BO94953 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.96□□□□□ -0.01
KDM4BO94953 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.96□□□□□ -0.01
KDM4BO94953 AC006449.5-201ENST00000610658 2098 ntBASIC14.96□□□□□ -0.01
KDM4BO94953 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.96□□□□□ -0.01
KDM4BO94953 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.96□□□□□ -0.01
KDM4BO94953 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.96□□□□□ -0.01
KDM4BO94953 AC002558.1-201ENST00000488906 803 ntBASIC14.96□□□□□ -0.01
KDM4BO94953 AC022616.7-201ENST00000525383 220 ntBASIC14.96□□□□□ -0.01
KDM4BO94953 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.96□□□□□ -0.01
KDM4BO94953 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.96□□□□□ -0.01
KDM4BO94953 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.96□□□□□ -0.01
KDM4BO94953 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.96□□□□□ -0.01
KDM4BO94953 AC093525.9-201ENST00000624961 1746 ntBASIC14.96□□□□□ -0.01
KDM4BO94953 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
KDM4BO94953 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.96□□□□□ -0.01
KDM4BO94953 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDM4BO94953 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
KDM4BO94953 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.96□□□□□ -0.02
KDM4BO94953 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.96□□□□□ -0.02
KDM4BO94953 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KDM4BO94953 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
KDM4BO94953 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDM4BO94953 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.95□□□□□ -0.02
KDM4BO94953 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KDM4BO94953 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KDM4BO94953 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDM4BO94953 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms