Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.7■□□□□ 0.74
CDKL5O76039 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL5O76039 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.7■□□□□ 0.74
CDKL5O76039 AC005593.1-201ENST00000624894 515 ntBASIC19.7■□□□□ 0.74
CDKL5O76039 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDKL5O76039 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL5O76039 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL5O76039 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL5O76039 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDKL5O76039 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL5O76039 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDKL5O76039 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.69■□□□□ 0.74
CDKL5O76039 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDKL5O76039 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.69■□□□□ 0.74
CDKL5O76039 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDKL5O76039 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.69■□□□□ 0.74
CDKL5O76039 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.69■□□□□ 0.74
CDKL5O76039 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.69■□□□□ 0.74
CDKL5O76039 AP002469.2-201ENST00000531724 424 ntBASIC19.69■□□□□ 0.74
CDKL5O76039 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.69■□□□□ 0.74
CDKL5O76039 AL773604.1-201ENST00000617417 272 ntBASIC19.69■□□□□ 0.74
CDKL5O76039 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDKL5O76039 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDKL5O76039 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.69■□□□□ 0.74
CDKL5O76039 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.69■□□□□ 0.74
CDKL5O76039 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL5O76039 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDKL5O76039 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDKL5O76039 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDKL5O76039 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 SLC25A6P2-201ENST00000497974 877 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 IGHV3-65-201ENST00000523210 341 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL5O76039 AL160237.2-201ENST00000556165 472 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.68■□□□□ 0.74
CDKL5O76039 REXO1L3P-201ENST00000622202 1288 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 AC148477.8-201ENST00000624298 468 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 FAM215A-202ENST00000632077 792 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL5O76039 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL5O76039 AC006277.1-201ENST00000624348 1610 ntBASIC19.68■□□□□ 0.74
CDKL5O76039 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.68■□□□□ 0.74
CDKL5O76039 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.68■□□□□ 0.74
CDKL5O76039 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDKL5O76039 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDKL5O76039 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.67■□□□□ 0.74
CDKL5O76039 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.67■□□□□ 0.74
CDKL5O76039 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDKL5O76039 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.67■□□□□ 0.74
CDKL5O76039 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDKL5O76039 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms