Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AL031432.2-201ENST00000566714 459 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AL928711.1-201ENST00000570165 459 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AP001350.2-201ENST00000625104 1094 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 AC092865.6-201ENST00000642101 219 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 RNF216P1-203ENST00000404404 2427 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF11O60813 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF11O60813 HMGA1P7-201ENST00000406908 502 ntBASIC17.14■□□□□ 0.33
PRAMEF11O60813 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.14■□□□□ 0.33
PRAMEF11O60813 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
PRAMEF11O60813 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.14■□□□□ 0.33
PRAMEF11O60813 AL513190.1-201ENST00000621254 727 ntBASIC17.14■□□□□ 0.33
PRAMEF11O60813 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF11O60813 PMS2P7-201ENST00000506558 1336 ntBASIC17.14■□□□□ 0.33
PRAMEF11O60813 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF11O60813 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF11O60813 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 PDPK2P-202ENST00000562415 1191 ntBASIC17.13■□□□□ 0.33
PRAMEF11O60813 AC040169.1-201ENST00000565382 521 ntBASIC17.13■□□□□ 0.33
PRAMEF11O60813 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 AL139011.1-202ENST00000642063 584 ntBASIC17.13■□□□□ 0.33
PRAMEF11O60813 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 PRORSD1P-202ENST00000563365 2154 ntBASIC17.13■□□□□ 0.33
PRAMEF11O60813 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF11O60813 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms