Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 SLC25A6P4-201ENST00000586535 553 ntBASIC16.29■□□□□ 0.2
PRAMEF4O60810 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 SLC22A20-204ENST00000530038 1673 ntBASIC16.29■□□□□ 0.2
PRAMEF4O60810 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF4O60810 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF4O60810 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 AL671710.1-201ENST00000610245 2349 ntBASIC16.28■□□□□ 0.2
PRAMEF4O60810 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 AL031284.1-201ENST00000419297 478 ntBASIC16.28■□□□□ 0.2
PRAMEF4O60810 PMS2P1-201ENST00000431037 1228 ntBASIC16.28■□□□□ 0.2
PRAMEF4O60810 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 MPDU1-223ENST00000582151 728 ntBASIC16.28■□□□□ 0.2
PRAMEF4O60810 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 AC117500.6-201ENST00000624871 588 ntBASIC16.28■□□□□ 0.2
PRAMEF4O60810 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF4O60810 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF4O60810 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF4O60810 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF4O60810 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF4O60810 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF4O60810 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF4O60810 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF4O60810 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 AP002490.2-201ENST00000524791 560 ntBASIC16.27■□□□□ 0.2
PRAMEF4O60810 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 AL773604.1-201ENST00000617417 272 ntBASIC16.27■□□□□ 0.2
PRAMEF4O60810 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF4O60810 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEF4O60810 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF4O60810 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF4O60810 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.27■□□□□ 0.19
PRAMEF4O60810 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF4O60810 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF4O60810 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PRAMEF4O60810 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms