Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.25■□□□□ 0.35
RIPK2O43353 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RIPK2O43353 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.25■□□□□ 0.35
RIPK2O43353 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.25■□□□□ 0.35
RIPK2O43353 AC104640.1-201ENST00000562617 2109 ntBASIC17.25■□□□□ 0.35
RIPK2O43353 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.25■□□□□ 0.35
RIPK2O43353 AC124864.1-201ENST00000623408 392 ntBASIC17.25■□□□□ 0.35
RIPK2O43353 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RIPK2O43353 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RIPK2O43353 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RIPK2O43353 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.25■□□□□ 0.35
RIPK2O43353 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RIPK2O43353 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RIPK2O43353 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RIPK2O43353 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RIPK2O43353 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.24■□□□□ 0.35
RIPK2O43353 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 HOMER2P1-201ENST00000455653 964 ntBASIC17.24■□□□□ 0.35
RIPK2O43353 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
RIPK2O43353 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.24■□□□□ 0.35
RIPK2O43353 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 AL603832.2-201ENST00000566195 2125 ntBASIC17.24■□□□□ 0.35
RIPK2O43353 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.24■□□□□ 0.35
RIPK2O43353 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RIPK2O43353 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPK2O43353 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RIPK2O43353 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RIPK2O43353 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.23■□□□□ 0.35
RIPK2O43353 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPK2O43353 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPK2O43353 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RIPK2O43353 AC087499.1-201ENST00000418141 1075 ntBASIC17.23■□□□□ 0.35
RIPK2O43353 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPK2O43353 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.23■□□□□ 0.35
RIPK2O43353 AC073592.5-201ENST00000624854 528 ntBASIC17.23■□□□□ 0.35
RIPK2O43353 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 AL021920.2-201ENST00000624828 1351 ntBASIC17.23■□□□□ 0.35
RIPK2O43353 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPK2O43353 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPK2O43353 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.22■□□□□ 0.35
RIPK2O43353 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
RIPK2O43353 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
RIPK2O43353 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.22■□□□□ 0.35
RIPK2O43353 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.22■□□□□ 0.35
RIPK2O43353 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
RIPK2O43353 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RIPK2O43353 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RIPK2O43353 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.22■□□□□ 0.35
RIPK2O43353 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.22■□□□□ 0.35
RIPK2O43353 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 TSPY5P-201ENST00000426936 936 ntBASIC17.22■□□□□ 0.35
RIPK2O43353 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.22■□□□□ 0.35
RIPK2O43353 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.22■□□□□ 0.35
RIPK2O43353 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RIPK2O43353 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPK2O43353 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms