Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.29■□□□□ 0.84
SEMA3EO15041 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SEMA3EO15041 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3EO15041 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3EO15041 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SEMA3EO15041 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 AC141586.5-201ENST00000624546 2050 ntBASIC20.28■□□□□ 0.84
SEMA3EO15041 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SEMA3EO15041 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SEMA3EO15041 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.28■□□□□ 0.84
SEMA3EO15041 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA3EO15041 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.28■□□□□ 0.84
SEMA3EO15041 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA3EO15041 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.28■□□□□ 0.84
SEMA3EO15041 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3EO15041 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA3EO15041 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SEMA3EO15041 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.27■□□□□ 0.84
SEMA3EO15041 AC067863.1-201ENST00000494933 530 ntBASIC20.27■□□□□ 0.84
SEMA3EO15041 AP002490.2-201ENST00000524791 560 ntBASIC20.27■□□□□ 0.84
SEMA3EO15041 AP000842.3-202ENST00000569238 1080 ntBASIC20.27■□□□□ 0.84
SEMA3EO15041 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.27■□□□□ 0.84
SEMA3EO15041 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 AC027307.2-201ENST00000591252 911 ntBASIC20.27■□□□□ 0.84
SEMA3EO15041 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA3EO15041 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.27■□□□□ 0.84
SEMA3EO15041 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SEMA3EO15041 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SEMA3EO15041 UXT-AS1-201ENST00000590504 1525 ntBASIC20.27■□□□□ 0.83
SEMA3EO15041 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SEMA3EO15041 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SEMA3EO15041 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SEMA3EO15041 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SEMA3EO15041 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SEMA3EO15041 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.26■□□□□ 0.83
SEMA3EO15041 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.26■□□□□ 0.83
SEMA3EO15041 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.26■□□□□ 0.83
SEMA3EO15041 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 CNN2P2-201ENST00000443536 909 ntBASIC20.26■□□□□ 0.83
SEMA3EO15041 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SEMA3EO15041 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 FAM86GP-201ENST00000448322 971 ntBASIC20.26■□□□□ 0.83
SEMA3EO15041 CNN2P3-201ENST00000450201 906 ntBASIC20.26■□□□□ 0.83
SEMA3EO15041 KRT18P34-201ENST00000488218 1270 ntBASIC20.26■□□□□ 0.83
SEMA3EO15041 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.26■□□□□ 0.83
SEMA3EO15041 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
SEMA3EO15041 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.26■□□□□ 0.83
SEMA3EO15041 AL136317.3-201ENST00000618497 906 ntBASIC20.26■□□□□ 0.83
SEMA3EO15041 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.26■□□□□ 0.83
SEMA3EO15041 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.26■□□□□ 0.83
SEMA3EO15041 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SEMA3EO15041 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.26■□□□□ 0.83
SEMA3EO15041 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA3EO15041 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA3EO15041 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms