Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SLC25A6P2-201ENST00000497974 877 ntBASIC18.14■□□□□ 0.49
FOXN3O00409 AC073648.2-201ENST00000510116 352 ntBASIC18.14■□□□□ 0.49
FOXN3O00409 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FOXN3O00409 REXO1L3P-201ENST00000622202 1288 ntBASIC18.14■□□□□ 0.49
FOXN3O00409 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXN3O00409 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXN3O00409 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXN3O00409 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FOXN3O00409 TOP3BP1-201ENST00000420768 1380 ntBASIC18.14■□□□□ 0.49
FOXN3O00409 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXN3O00409 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
FOXN3O00409 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
FOXN3O00409 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
FOXN3O00409 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 AC079781.3-201ENST00000449110 356 ntBASIC18.13■□□□□ 0.49
FOXN3O00409 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXN3O00409 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXN3O00409 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.13■□□□□ 0.49
FOXN3O00409 RN7SL510P-201ENST00000581311 263 ntBASIC18.13■□□□□ 0.49
FOXN3O00409 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 AC148477.8-201ENST00000624298 468 ntBASIC18.13■□□□□ 0.49
FOXN3O00409 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
FOXN3O00409 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FOXN3O00409 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 AL662844.4-201ENST00000606367 2838 ntBASIC18.13■□□□□ 0.49
FOXN3O00409 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXN3O00409 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXN3O00409 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FOXN3O00409 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FOXN3O00409 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 AC018712.1-201ENST00000455767 687 ntBASIC18.12■□□□□ 0.49
FOXN3O00409 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.12■□□□□ 0.49
FOXN3O00409 RPS15P9-201ENST00000494093 319 ntBASIC18.12■□□□□ 0.49
FOXN3O00409 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.12■□□□□ 0.49
FOXN3O00409 AC012640.2-201ENST00000561606 901 ntBASIC18.12■□□□□ 0.49
FOXN3O00409 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
FOXN3O00409 AC013467.2-201ENST00000605472 835 ntBASIC18.12■□□□□ 0.49
FOXN3O00409 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.12■□□□□ 0.49
FOXN3O00409 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
FOXN3O00409 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXN3O00409 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.12■□□□□ 0.49
FOXN3O00409 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FOXN3O00409 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXN3O00409 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXN3O00409 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FOXN3O00409 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXN3O00409 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FOXN3O00409 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXN3O00409 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms