Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPA2E9PIF3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPA2E9PIF3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPA2E9PIF3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPA2E9PIF3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 KRT19P2-202ENST00000557173 1012 ntBASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 AC023141.13-201ENST00000604991 943 ntBASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA2E9PIF3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA2E9PIF3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.46■□□□□ 0.06
NPIPA2E9PIF3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.46■□□□□ 0.06
NPIPA2E9PIF3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA2E9PIF3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 PMS2P2-201ENST00000425039 1128 ntBASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 CEND1P1-201ENST00000451006 455 ntBASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 CXCL1P1-201ENST00000502804 216 ntBASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 PDPK2P-202ENST00000562415 1191 ntBASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA2E9PIF3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA2E9PIF3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms