Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB4C9JG80 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB4C9JG80 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB4C9JG80 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB4C9JG80 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPB4C9JG80 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 GGT3P-204ENST00000453783 1664 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 ME2P1-201ENST00000426028 1970 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 MRPL20P1-201ENST00000400819 433 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 AL450487.1-201ENST00000426799 995 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 RN7SL510P-201ENST00000581311 263 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CYP2A7P1-201ENST00000595391 815 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 FAM215A-202ENST00000632077 792 ntBASIC14.97□□□□□ -0.01
NPIPB4C9JG80 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB4C9JG80 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 CYP2T1P-202ENST00000641596 2535 ntBASIC14.96□□□□□ -0.01
NPIPB4C9JG80 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 PRSS29P-201ENST00000440800 595 ntBASIC14.96□□□□□ -0.01
NPIPB4C9JG80 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 AC010654.1-201ENST00000615722 808 ntBASIC14.96□□□□□ -0.01
NPIPB4C9JG80 AL773604.1-201ENST00000617417 272 ntBASIC14.96□□□□□ -0.01
NPIPB4C9JG80 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB4C9JG80 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.96□□□□□ -0.02
NPIPB4C9JG80 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPB4C9JG80 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.96□□□□□ -0.02
NPIPB4C9JG80 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
NPIPB4C9JG80 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 AC092171.3-201ENST00000610122 2651 ntBASIC14.95□□□□□ -0.02
NPIPB4C9JG80 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 PMS2P1-201ENST00000431037 1228 ntBASIC14.95□□□□□ -0.02
NPIPB4C9JG80 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPB4C9JG80 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms